Coding

Part:BBa_K3670000:Design

Designed by: Patricia A. Colom Díaz   Group: iGEM20_RUM-UPRM   (2020-10-24)


XplA/B play a key role in the biodegradation of RDX.


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal EcoRI site found at 936
    Illegal EcoRI site found at 1847
    Illegal EcoRI site found at 2288
    Illegal PstI site found at 1714
    Illegal PstI site found at 2775
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal EcoRI site found at 936
    Illegal EcoRI site found at 1847
    Illegal EcoRI site found at 2288
    Illegal PstI site found at 1714
    Illegal PstI site found at 2775
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal EcoRI site found at 936
    Illegal EcoRI site found at 1847
    Illegal EcoRI site found at 2288
    Illegal BglII site found at 1897
    Illegal BamHI site found at 2281
    Illegal BamHI site found at 2485
    Illegal XhoI site found at 2819
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal EcoRI site found at 936
    Illegal EcoRI site found at 1847
    Illegal EcoRI site found at 2288
    Illegal PstI site found at 1714
    Illegal PstI site found at 2775
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal EcoRI site found at 936
    Illegal EcoRI site found at 1847
    Illegal EcoRI site found at 2288
    Illegal PstI site found at 1714
    Illegal PstI site found at 2775
    Illegal NgoMIV site found at 148
    Illegal NgoMIV site found at 840
    Illegal NgoMIV site found at 1682
    Illegal NgoMIV site found at 1957
    Illegal NgoMIV site found at 2133
    Illegal NgoMIV site found at 2158
    Illegal NgoMIV site found at 2511
    Illegal AgeI site found at 942
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI.rc site found at 751
    Illegal BsaI.rc site found at 1796


Design Notes

This sequence was obtained from GenBank and was designed by Seth-Smith, H.M.B. and Bruce, N.C.


Source

Rhodococcus rhodochrous strain 11Y


References

[1] S., & B. (2001). Rhodococcus rhodochrous strain 11Y adrenodoxin reductase-like (xplB) a - Nucleotide - NCBI. Retrieved October 25, 2020, from https://www.ncbi.nlm.nih.gov/nuccore/AF449421.1